Sequence Similarity Clusters for the Entities in PDB 1BVL

Entity #1 | Chains: A,C
HULYS11 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24145
95 % 2 2 20619 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 20043
70 % 24 36 1276
50 % 453 594 7
40 % 717 948 5
30 % 798 1077 7
Entity #2 | Chains: B,D
HULYS11 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24341
95 % 2 2 20779 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 20191
70 % 138 192 74
50 % 223 309 23
40 % 718 948 5
30 % 799 1077 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures