Sequence Similarity Clusters for the Entities in PDB 1BVL

Entity #1 | Chains: A,C
HULYS11 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24518
95 % 2 2 20914 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 2 20321
70 % 56 76 540
50 % 456 603 7
40 % 720 963 5
30 % 801 1093 7
Entity #2 | Chains: B,D
HULYS11 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24719
95 % 2 2 21077 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 20471
70 % 138 195 75
50 % 223 315 23
40 % 721 963 5
30 % 802 1093 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures