Sequence Similarity Clusters for the Entities in PDB 1BVD

Entity #1 | Chains: A
APOMYOGLOBIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 96 339
95 % 63 273 122 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 63 273 125
70 % 86 379 75
50 % 86 381 101
40 % 95 391 120
30 % 125 1281 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures