Sequence Similarity Clusters for the Entities in PDB 1BUV

Entity #1 | Chains: M
PROTEIN (MEMBRANE-TYPE MATRIX METALLOPROTEINASE (CDMT1-MMP)) protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 21296
95 % 2 3 18420 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 17938
70 % 2 3 16615
50 % 180 229 95
40 % 184 233 118
30 % 184 233 129
Entity #2 | Chains: T
PROTEIN (METALLOPROTEINASE INHIBITOR (TIMP-2)) protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27354
95 % 2 3 22753 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 4 6 9052
70 % 4 6 8644
50 % 4 6 7823
40 % 5 8 5301
30 % 5 8 4765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.