Sequence Similarity Clusters for the Entities in PDB 1BUI

Entity #1 | Chains: A,B
Plasminogen protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 12515
95 % 7 10 3261 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 7 10 3304
70 % 7 10 3277
50 % 7 10 3198
40 % 1537 1685 4
30 % 1660 1834 6
Entity #2 | Chains: C
Staphylokinase protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28752
95 % 6 7 7202 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 6 7 7164
70 % 6 7 6988
50 % 6 7 6441
40 % 6 7 6002
30 % 6 7 5371

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.