Sequence Similarity Clusters for the Entities in PDB 1BUI

Entity #1 | Chains: A,B
Plasminogen protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 12323
95 % 7 10 3215 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 7 10 3260
70 % 7 10 3228
50 % 7 10 3150
40 % 1534 1682 4
30 % 1657 1831 6
Entity #2 | Chains: C
Staphylokinase protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28240
95 % 6 7 7084 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 6 7 7051
70 % 6 7 6840
50 % 6 7 6321
40 % 6 7 5891
30 % 6 7 5279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.