Sequence Similarity Clusters for the Entities in PDB 1BUH

Entity #1 | Chains: A
PROTEIN (CDK2 HUMAN) protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 306 366 26
95 % 319 383 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 319 383 38
70 % 319 383 46
50 % 341 433 65
40 % 350 465 54
30 % 3012 4300 2
Entity #2 | Chains: B
PROTEIN (CKSHS1 HUMAN) protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7926
95 % 1 4 7997 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 1 4 7923
70 % 5 9 3983
50 % 5 9 3885
40 % 5 9 3687
30 % 5 9 3385

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures