Sequence Similarity Clusters for the Entities in PDB 1BUH

Entity #1 | Chains: A
PROTEIN (CDK2 HUMAN) protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 302 365 23
95 % 316 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 316 380 38
70 % 316 380 44
50 % 333 405 68
40 % 347 462 49
30 % 2774 3966 2
Entity #2 | Chains: B
PROTEIN (CKSHS1 HUMAN) protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7676
95 % 1 4 8231 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 1 4 8178
70 % 5 9 3911
50 % 5 9 3794
40 % 5 9 3651
30 % 5 9 3418

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures