Sequence Similarity Clusters for the Entities in PDB 1BUA

Entity #1 | Chains: C,D
DNA (5'-D(*AP*AP*AP*GP*AP*CP*IP*TP*CP*TP*T)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ENDONUCLEASE ECORV protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 23 809
95 % 22 31 785 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 22 31 814
70 % 22 31 857
50 % 22 31 912
40 % 22 31 937
30 % 22 31 917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.