Sequence Similarity Clusters for the Entities in PDB 1BTH

Entity #1 | Chains: J,L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 262 338 45
95 % 263 339 62 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 263 339 66
70 % 264 341 78
50 % 264 341 107
40 % 264 341 130
30 % 264 341 137
Entity #2 | Chains: H,K
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38702
95 % 291 377 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 294 384 39
70 % 303 408 46
50 % 303 408 84
40 % 1376 1719 4
30 % 1482 1869 6
Entity #3 | Chains: P,Q
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 44 366
95 % 71 90 255 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 76 95 260
70 % 95 115 177
50 % 109 149 182
40 % 113 163 178
30 % 113 163 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures