Sequence Similarity Clusters for the Entities in PDB 1BTH

Entity #1 | Chains: J,L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 260 335 45
95 % 261 336 61 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 261 336 66
70 % 262 338 77
50 % 262 338 102
40 % 262 338 126
30 % 262 338 137
Entity #2 | Chains: H,K
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38139
95 % 289 374 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 292 381 39
70 % 301 405 45
50 % 301 405 81
40 % 1359 1695 4
30 % 1465 1845 6
Entity #3 | Chains: P,Q
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 44 324
95 % 71 90 245 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 76 95 248
70 % 95 115 174
50 % 109 148 176
40 % 113 162 176
30 % 113 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.