Sequence Similarity Clusters for the Entities in PDB 1BTH

Entity #1 | Chains: J,L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 258 333 44
95 % 259 334 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 259 334 64
70 % 260 336 77
50 % 260 336 100
40 % 260 336 124
30 % 260 336 136
Entity #2 | Chains: H,K
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37022
95 % 287 372 36 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 290 379 38
70 % 299 403 45
50 % 299 403 78
40 % 1347 1679 4
30 % 1453 1827 6
Entity #3 | Chains: P,Q
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 44 304
95 % 71 90 235 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.6
PDBFlex
90 % 76 95 241
70 % 95 115 174
50 % 109 148 172
40 % 113 162 172
30 % 113 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.