Sequence Similarity Clusters for the Entities in PDB 1BTH

Entity #1 | Chains: J,L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 259 334 53
95 % 264 342 63 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 264 342 67
70 % 264 342 81
50 % 264 342 112
40 % 264 342 135
30 % 264 342 146
Entity #2 | Chains: H,K
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 259 332 52
95 % 291 378 53 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 294 385 56
70 % 303 409 47
50 % 303 409 85
40 % 1492 1885 4
30 % 1501 1899 7
Entity #3 | Chains: P,Q
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 70 259
95 % 72 91 264 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 76 95 265
70 % 95 115 182
50 % 109 149 188
40 % 114 164 190
30 % 114 164 208

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures