Sequence Similarity Clusters for the Entities in PDB 1BTH

Entity #1 | Chains: J,L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 262 338 45
95 % 263 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 263 339 67
70 % 264 341 78
50 % 264 341 109
40 % 264 341 132
30 % 264 341 140
Entity #2 | Chains: H,K
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39463
95 % 291 377 52 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 294 384 48
70 % 303 408 46
50 % 303 408 84
40 % 1482 1863 4
30 % 1492 1885 6
Entity #3 | Chains: P,Q
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 44 377
95 % 71 90 260 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 76 95 264
70 % 95 115 179
50 % 109 149 187
40 % 113 163 182
30 % 113 163 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures