Sequence Similarity Clusters for the Entities in PDB 1BSS

Entity #1 | Chains: C,D
5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3' dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ECORV ENDONUCLEASE protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21330
95 % 19 31 816 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 19 31 847
70 % 19 31 886
50 % 19 31 930
40 % 19 31 960
30 % 19 31 944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures