Sequence Similarity Clusters for the Entities in PDB 1BS8

Entity #1 | Chains: A,B,C
PROTEIN (PEPTIDE DEFORMYLASE) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 21 833
95 % 15 23 1083 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 15 23 1107
70 % 16 24 1094
50 % 24 33 813
40 % 43 66 450
30 % 84 122 233
Entity #2 | Chains: D,E,F
PROTEIN (MET-ALA-SER) protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures