Sequence Similarity Clusters for the Entities in PDB 1BS8

Entity #1 | Chains: A,B,C
PROTEIN (PEPTIDE DEFORMYLASE) protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 21 787
95 % 15 23 1028 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 15 23 1045
70 % 16 24 1038
50 % 23 32 789
40 % 42 65 424
30 % 83 121 220
Entity #2 | Chains: D,E,F
PROTEIN (MET-ALA-SER) protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.