Sequence Similarity Clusters for the Entities in PDB 1BRR

Entity #1 | Chains: A,B,C
PROTEIN (BACTERIORHODOPSIN) protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 68 77 367
95 % 110 120 247 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 111 121 261
70 % 111 121 298
50 % 125 136 262
40 % 125 136 277
30 % 178 194 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures