Sequence Similarity Clusters for the Entities in PDB 1BRQ

Entity #1 | Chains: A
RETINOL BINDING PROTEIN protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 15 3711
95 % 15 18 3168 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 27 31 1759
70 % 27 32 1689
50 % 27 32 1731
40 % 27 32 1720
30 % 27 32 1685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5NU2 1 A Retinol-binding protein 4 9606
2 5NU9 1 A Retinol-binding protein 4 9606
3 5NU7 1 A Retinol-binding protein 4 9606
4 5NU8 1 A Retinol-binding protein 4 9606
5 5NUA 1 A Retinol-binding protein 4 9606
6 5NUB 1 A Retinol-binding protein 4 9606
7 5NU6 1 A Retinol-binding protein 4 9606
8 2WQ9 1 A RETINOL-BINDING PROTEIN 4 RESIDUES 19-192 9606
9 2WR6 1 A RETINOL-BINDING PROTEIN 4 RESIDUES 19-192 9606
10 1JYD 1 A PLASMA RETINOL-BINDING PROTEIN 9606
11 5NTY 1 A Retinol-binding protein 4 9606
12 1RBP 1 A PLASMA RETINOL-BINDING PROTEIN PRECURSOR 9606
13 1JYJ 1 A PLASMA RETINOL-BINDING PROTEIN 9606
14 1BRP 1 A RETINOL BINDING PROTEIN 9606
15 1BRQ 1 A RETINOL BINDING PROTEIN 9606
16 2WQA 2 E, F RETINOL-BINDING PROTEIN 4 9606
17 3BSZ 2 E, F Plasma retinol-binding protein 9606
18 1QAB 2 E, F PROTEIN (retinol binding protein) 9606