Sequence Similarity Clusters for the Entities in PDB 1BRN

Entity #1 | Chains: A,B
DNA (5'-D(*CP*GP*AP*C)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: L,M
PROTEIN (BARNASE (E.C.3.1.27.-)) protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 20 700
95 % 5 48 294
90 % 5 48 305
70 % 6 54 303
50 % 6 54 360
40 % 6 54 386
30 % 6 54 387

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.