Sequence Similarity Clusters for the Entities in PDB 1BRL

Entity #1 | Chains: A,C
BACTERIAL LUCIFERASE protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15993
95 % 2 3 14878 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 2 3 14573
70 % 2 3 13639
50 % 2 3 12078
40 % 2 3 10837
30 % 6 9 3167
Entity #2 | Chains: B,D
BACTERIAL LUCIFERASE protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 8175
95 % 4 5 8238 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 5 8168
70 % 4 5 7865
50 % 5 6 5023
40 % 5 6 4714
30 % 7 9 3167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures