Sequence Similarity Clusters for the Entities in PDB 1BRL

Entity #1 | Chains: A,C
BACTERIAL LUCIFERASE protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14988
95 % 2 3 14151 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 2 3 13933
70 % 2 3 13111
50 % 2 3 11668
40 % 2 3 10580
30 % 2 3 9227
Entity #2 | Chains: B,D
BACTERIAL LUCIFERASE protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7180
95 % 4 5 7751 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 5 7695
70 % 4 5 7486
50 % 4 5 6902
40 % 4 5 6417
30 % 4 5 5737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures