Sequence Similarity Clusters for the Entities in PDB 1BRD

Entity #1 | Chains: A
BACTERIORHODOPSIN PRECURSOR protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 63 534
95 % 120 120 266
90 % 121 121 274
70 % 121 121 316
50 % 136 136 278
40 % 136 136 308
30 % 194 194 193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures