Sequence Similarity Clusters for the Entities in PDB 1BRC

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27538
95 % 31 36 1335 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 31 36 1363
70 % 498 532 19
50 % 609 683 14
40 % 1391 1696 4
30 % 1499 1846 6
Entity #2 | Chains: I
AMYLOID BETA-PROTEIN PRECURSOR INHIBITOR DOMAIN (APPI) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 5893
95 % 5 7 4544 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 5 7 4564
70 % 5 7 4474
50 % 112 148 178
40 % 116 162 176
30 % 116 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.