Sequence Similarity Clusters for the Entities in PDB 1BRC

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28516
95 % 31 36 1387 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 31 36 1413
70 % 518 557 19
50 % 629 708 14
40 % 1519 1863 4
30 % 1529 1885 6
Entity #2 | Chains: I
AMYLOID BETA-PROTEIN PRECURSOR INHIBITOR DOMAIN (APPI) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 6115
95 % 5 7 4720 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 5 7 4748
70 % 5 7 4645
50 % 112 149 187
40 % 116 163 182
30 % 116 163 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures