Sequence Similarity Clusters for the Entities in PDB 1BRB

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 22 2183
95 % 23 36 1531 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 23 36 1576
70 % 497 567 17
50 % 574 719 13
40 % 1346 1926 4
30 % 1353 1940 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51323
95 % 67 96 259 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 76 105 249
70 % 92 125 184
50 % 104 159 194
40 % 108 174 184
30 % 108 174 207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3FP7 1 E Anionic trypsin-2 10116 3.4.21.4 | Details
2 3FP8 1 E Anionic trypsin-2 10116 3.4.21.4 | Details
3 3FP6 1 E Anionic trypsin-2 10116 3.4.21.4 | Details
4 1DPO 1 A TRYPSIN ANIONIC TRYPSIN 10117 3.4.21.4 | Details
5 1YLD 1 A Trypsin II 10116 3.4.21.4 | Details
6 1YLC 1 A Trypsin II 10116 3.4.21.4 | Details
7 1YKT 1 A Trypsin II 10116 3.4.21.4 | Details
8 3TGI 1 E TRYPSIN 10116 3.4.21.4 | Details
9 1ANC 1 A ANIONIC TRYPSIN 10117 3.4.21.4 | Details
10 1BRA 1 A TRYPSIN 10117 3.4.21.4 | Details
11 1ANE 1 A ANIONIC TRYPSIN 10117 3.4.21.4 | Details
12 1BRB 1 E TRYPSIN 10116 3.4.21.4 | Details
13 1K9O 2 E TRYPSIN II ANIONIC 10116 3.4.21.4 | Details
14 1TRM 1 A, B TRYPSIN 10117 3.4.21.4 | Details
15 1EZS 2 C, D TRYPSIN II, ANIONIC 10116 3.4.21.4 | Details
16 1QL9 1 A TRYPSIN VARIANT X99RT\: RAT TRYPSIN CONTAINING THE "99"-LOOP OF FACTOR XA 10116 3.4.21.4 | Details
17 1BRC 1 E TRYPSIN 10116 3.4.21.4 | Details
18 1J14 1 A trypsin II, anionic 10116 3.4.21.4 | Details
19 1AMH 1 A, B ANIONIC TRYPSIN 10117 3.4.21.4 | Details
20 2TRM 1 A TRYPSIN 10116 3.4.21.4 | Details
21 1EZU 2 C, D TRYPSIN II, ANIONIC 10116 3.4.21.4 | Details
22 1ANB 1 A ANIONIC TRYPSIN 10117 3.4.21.4 | Details