Sequence Similarity Clusters for the Entities in PDB 1BR4

Entity #1 | Chains: A,C,E,G
MYOSIN protein, length: 820 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4644
95 % 5 5 4211 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.2
PDBFlex
90 % 5 5 4259
70 % 5 5 4176
50 % 64 91 350
40 % 77 111 274
30 % 97 135 236
Entity #2 | Chains: B,D,F,H
MYOSIN protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 3987
95 % 2 6 4339 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 6 4382
70 % 6 25 652
50 % 6 25 701
40 % 235 361 40
30 % 291 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures