Sequence Similarity Clusters for the Entities in PDB 1BR4

Entity #1 | Chains: A,C,E,G
MYOSIN protein, length: 820 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 3803
95 % 5 5 3866 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.2
PDBFlex
90 % 5 5 3910
70 % 5 5 3868
50 % 26 50 452
40 % 73 101 291
30 % 95 126 241
Entity #2 | Chains: B,D,F,H
MYOSIN protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 3460
95 % 2 6 4231 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 6 4263
70 % 6 25 618
50 % 6 25 665
40 % 225 341 42
30 % 246 368 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures