Sequence Similarity Clusters for the Entities in PDB 1BR1

Entity #1 | Chains: A,C,E,G
MYOSIN protein, length: 820 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 3838
95 % 4 5 3900 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.2
PDBFlex
90 % 4 5 3942
70 % 4 5 3897
50 % 17 50 453
40 % 63 101 294
30 % 85 130 218
Entity #2 | Chains: B,D,F,H
MYOSIN protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 3493
95 % 1 6 4265 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 6 4294
70 % 5 25 621
50 % 5 25 667
40 % 198 344 38
30 % 219 371 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures