Sequence Similarity Clusters for the Entities in PDB 1BR1

Entity #1 | Chains: A,C,E,G
MYOSIN protein, length: 820 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4663
95 % 4 5 4225 Flexibility: Low
Max RMSD: 6.1, Avg RMSD: 2.0
PDBFlex
90 % 4 5 4274
70 % 4 5 4192
50 % 54 91 361
40 % 67 111 276
30 % 87 135 234
Entity #2 | Chains: B,D,F,H
MYOSIN protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4008
95 % 1 6 4356 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 6 4399
70 % 5 25 653
50 % 5 25 701
40 % 206 361 40
30 % 261 432 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures