Sequence Similarity Clusters for the Entities in PDB 1BQY

Entity #1 | Chains: A,B
PLASMINOGEN ACTIVATOR protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39487
95 % 1 1 30376 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 29301
70 % 7 8 7530
50 % 10 12 4849
40 % 1421 1698 4
30 % 1533 1848 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.