Sequence Similarity Clusters for the Entities in PDB 1BQY

Entity #1 | Chains: A,B
PLASMINOGEN ACTIVATOR protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40691
95 % 1 1 31239 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 30107
70 % 7 8 7762
50 % 10 12 4998
40 % 1553 1863 4
30 % 1563 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures