Sequence Similarity Clusters for the Entities in PDB 1BQS

Entity #1 | Chains: A
PROTEIN (MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1) protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 15769
95 % 5 6 8002 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 2.6
PDBFlex
90 % 5 6 7939
70 % 5 6 7696
50 % 5 6 7087
40 % 5 6 6586
30 % 5 6 5879

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures