Sequence Similarity Clusters for the Entities in PDB 1BQQ

Entity #1 | Chains: M
MEMBRANE-TYPE MATRIX METALLOPROTEINASE protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20438
95 % 3 3 17700
90 % 3 3 17244
70 % 3 3 15992
50 % 178 225 93
40 % 182 229 115
30 % 182 229 128
Entity #2 | Chains: T
METALLOPROTEINASE INHIBITOR 2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26312
95 % 3 3 21890
90 % 5 6 8662
70 % 5 6 8283
50 % 5 6 7520
40 % 6 8 5093
30 % 6 8 4572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.