Sequence Similarity Clusters for the Entities in PDB 1BQQ

Entity #1 | Chains: M
MEMBRANE-TYPE MATRIX METALLOPROTEINASE protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 21673
95 % 3 3 18762
90 % 3 3 18268
70 % 3 3 16884
50 % 181 229 96
40 % 185 233 119
30 % 185 233 129
Entity #2 | Chains: T
METALLOPROTEINASE INHIBITOR 2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27836
95 % 3 3 23154
90 % 5 6 9192
70 % 5 6 8799
50 % 5 6 7962
40 % 6 8 5389
30 % 6 8 4834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.