Sequence Similarity Clusters for the Entities in PDB 1BQQ

Entity #1 | Chains: M
MEMBRANE-TYPE MATRIX METALLOPROTEINASE protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20738
95 % 3 3 17954
90 % 3 3 17499
70 % 3 3 16220
50 % 178 225 96
40 % 182 229 118
30 % 182 229 129
Entity #2 | Chains: T
METALLOPROTEINASE INHIBITOR 2 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26680
95 % 3 3 22182
90 % 5 6 8801
70 % 5 6 8419
50 % 5 6 7639
40 % 6 8 5174
30 % 6 8 4641

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.