Sequence Similarity Clusters for the Entities in PDB 1BQP

Entity #1 | Chains: A,C
PROTEIN (LECTIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9658
95 % 3 5 7386 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 8 19 1285
70 % 8 20 1248
50 % 8 20 1308
40 % 8 20 1317
30 % 8 20 1294
Entity #2 | Chains: B,D
PROTEIN (LECTIN) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7115
95 % 3 5 7694 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 5 7641
70 % 8 20 1256
50 % 8 20 1315
40 % 8 20 1326
30 % 8 20 1303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures