Sequence Similarity Clusters for the Entities in PDB 1BQP

Entity #1 | Chains: A,C
PROTEIN (LECTIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 9129
95 % 3 5 7029
90 % 8 19 1216
70 % 8 20 1195
50 % 8 20 1250
40 % 8 20 1265
30 % 8 20 1238
Entity #2 | Chains: B,D
PROTEIN (LECTIN) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 6757
95 % 3 5 7322
90 % 3 5 7275
70 % 8 20 1200
50 % 8 20 1256
40 % 8 20 1272
30 % 8 20 1245

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.