Sequence Similarity Clusters for the Entities in PDB 1BQP

Entity #1 | Chains: A,C
PROTEIN (LECTIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9275
95 % 3 5 7136 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 8 19 1232
70 % 8 20 1213
50 % 8 20 1265
40 % 8 20 1276
30 % 8 20 1249
Entity #2 | Chains: B,D
PROTEIN (LECTIN) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6866
95 % 3 5 7436 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 5 7382
70 % 8 20 1219
50 % 8 20 1272
40 % 8 20 1284
30 % 8 20 1257

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.