Sequence Similarity Clusters for the Entities in PDB 1BQP

Entity #1 | Chains: A,C
PROTEIN (LECTIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9000
95 % 3 5 6900 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 8 19 1199
70 % 8 20 1182
50 % 8 20 1230
40 % 8 20 1243
30 % 8 20 1220
Entity #2 | Chains: B,D
PROTEIN (LECTIN) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6644
95 % 3 5 7183 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 5 7138
70 % 8 20 1187
50 % 8 20 1234
40 % 8 20 1249
30 % 8 20 1226

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.