Sequence Similarity Clusters for the Entities in PDB 1BQP

Entity #1 | Chains: A,C
PROTEIN (LECTIN) protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9491
95 % 3 5 7289 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 8 19 1270
70 % 8 20 1234
50 % 8 20 1294
40 % 8 20 1306
30 % 8 20 1278
Entity #2 | Chains: B,D
PROTEIN (LECTIN) protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7019
95 % 3 5 7593 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 5 7540
70 % 8 20 1240
50 % 8 20 1301
40 % 8 20 1315
30 % 8 20 1288

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures