Sequence Similarity Clusters for the Entities in PDB 1BQO

Entity #1 | Chains: A,B
STROMELYSIN-1 protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 38 573
95 % 20 39 753 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.8
PDBFlex
90 % 20 39 786
70 % 22 42 743
50 % 174 232 98
40 % 178 236 120
30 % 178 236 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.