Sequence Similarity Clusters for the Entities in PDB 1BQM

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 556 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 25 1186
95 % 222 237 106 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 222 237 110
70 % 222 237 126
50 % 223 238 150
40 % 223 238 168
30 % 223 238 184
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 88 94 216
95 % 216 231 112 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.6
PDBFlex
90 % 216 231 117
70 % 216 231 135
50 % 217 232 164
40 % 217 232 179
30 % 217 232 193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.