Sequence Similarity Clusters for the Entities in PDB 1BQM

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 556 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 26 1200
95 % 237 252 92 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 237 252 97
70 % 237 252 114
50 % 238 253 152
40 % 239 254 165
30 % 239 254 179
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 105 206
95 % 231 246 116
90 % 231 246 120
70 % 231 246 136
50 % 233 248 159
40 % 233 248 176
30 % 233 248 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures