Sequence Similarity Clusters for the Entities in PDB 1BQM

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 556 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 27 1194
95 % 241 256 112 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 241 256 117
70 % 241 256 130
50 % 242 257 157
40 % 243 258 168
30 % 243 258 179
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 100 106 209
95 % 235 250 118
90 % 235 250 122
70 % 235 250 137
50 % 237 252 164
40 % 237 252 175
30 % 237 252 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures