Sequence Similarity Clusters for the Entities in PDB 1BQM

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 556 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 26 1179
95 % 233 248 89 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 233 248 94
70 % 233 248 113
50 % 234 249 149
40 % 234 249 164
30 % 234 249 180
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 105 201
95 % 227 242 113
90 % 227 242 117
70 % 227 242 133
50 % 228 243 156
40 % 228 243 175
30 % 228 243 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.