Sequence Similarity Clusters for the Entities in PDB 1BPW

Entity #1 | Chains: A,B,C,D
PROTEIN (ALDEHYDE DEHYDROGENASE) protein, length: 503 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7848
95 % 2 2 8351 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 2 8294
70 % 2 2 7985
50 % 10 10 1404
40 % 145 150 23
30 % 266 273 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures