Sequence Similarity Clusters for the Entities in PDB 1BPL

Entity #1 | Chains: A
ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62985
95 % 1 1 43915
90 % 1 1 41679
70 % 1 1 36648
50 % 1 1 31222
40 % 1 1 27535
30 % 1 1 23347
Entity #2 | Chains: B
ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57189
95 % 1 1 40858
90 % 1 1 39022
70 % 1 1 34625
50 % 1 1 29572
40 % 1 1 26091
30 % 1 1 22174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures