Sequence Similarity Clusters for the Entities in PDB 1BPD

Entity #1 | Chains: A
DNA POLYMERASE BETA protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 5769
95 % 319 322 80 Flexibility: Medium
Max RMSD: 14.0, Avg RMSD: 3.1
PDBFlex
90 % 319 322 83
70 % 319 322 99
50 % 319 322 138
40 % 319 322 152
30 % 446 452 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures