Sequence Similarity Clusters for the Entities in PDB 1BP3

Entity #1 | Chains: A
PROTEIN (GROWTH HORMONE) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 21109
95 % 6 6 12822 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.6
PDBFlex
90 % 9 9 7313
70 % 10 10 6501
50 % 10 10 6056
40 % 10 10 5632
30 % 10 10 4982
Entity #2 | Chains: B
PROTEIN (PROLACTIN RECEPTOR) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 8585
95 % 9 10 6664 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.5
PDBFlex
90 % 9 10 6658
70 % 10 13 3910
50 % 10 13 3804
40 % 10 13 3617
30 % 13 19 1893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures