Sequence Similarity Clusters for the Entities in PDB 1BP3

Entity #1 | Chains: A
PROTEIN (GROWTH HORMONE) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29107
95 % 6 6 13058 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.7
PDBFlex
90 % 9 9 7342
70 % 10 10 6459
50 % 10 10 6039
40 % 10 10 5651
30 % 10 10 5069
Entity #2 | Chains: B
PROTEIN (PROLACTIN RECEPTOR) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 9510
95 % 9 10 6629 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 9 10 6618
70 % 10 13 3892
50 % 10 13 3783
40 % 10 13 3638
30 % 11 15 2783

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures