Sequence Similarity Clusters for the Entities in PDB 1BP3

Entity #1 | Chains: A
PROTEIN (GROWTH HORMONE) protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28530
95 % 6 6 12772 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.7
PDBFlex
90 % 9 9 7187
70 % 10 10 6331
50 % 10 10 5923
40 % 10 10 5548
30 % 10 10 4973
Entity #2 | Chains: B
PROTEIN (PROLACTIN RECEPTOR) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 9265
95 % 9 10 6499 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 9 10 6480
70 % 10 13 3798
50 % 10 13 3694
40 % 10 13 3557
30 % 11 15 2734

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures