Sequence Similarity Clusters for the Entities in PDB 1BOG

Entity #1 | Chains: A
ANTIBODY (CB 4-1) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61502
95 % 1 8 9441 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 15 26 2170
70 % 1648 2392 1
50 % 3339 4843 1
40 % 3339 4843 1
30 % 3920 5705 1
Entity #2 | Chains: B
ANTIBODY (CB 4-1) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 9243
95 % 1 8 9444 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 8 9339
70 % 1610 2342 2
50 % 3340 4843 1
40 % 3340 4843 1
30 % 3921 5705 1
Entity #3 | Chains: C
PEPTIDE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures