Sequence Similarity Clusters for the Entities in PDB 1BOG

Entity #1 | Chains: A
ANTIBODY (CB 4-1) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 9741
95 % 1 8 9577 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 16 27 2155
70 % 1749 2553 1
50 % 3553 5180 1
40 % 4026 5834 1
30 % 5007 7269 1
Entity #2 | Chains: B
ANTIBODY (CB 4-1) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 9091
95 % 1 8 9043 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 8 8950
70 % 1716 2511 2
50 % 3554 5180 1
40 % 4027 5834 1
30 % 5008 7269 1
Entity #3 | Chains: C
PEPTIDE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures