Sequence Similarity Clusters for the Entities in PDB 1BOG

Entity #1 | Chains: A
ANTIBODY (CB 4-1) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60219
95 % 1 8 9250 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 15 26 2116
70 % 1569 2287 1
50 % 3182 4633 1
40 % 3182 4633 1
30 % 3734 5461 1
Entity #2 | Chains: B
ANTIBODY (CB 4-1) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 9018
95 % 1 8 9253
90 % 1 8 9156
70 % 1538 2244 2
50 % 3183 4633 1
40 % 3183 4633 1
30 % 3735 5461 1
Entity #3 | Chains: C
PEPTIDE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.