Sequence Similarity Clusters for the Entities in PDB 1BOG

Entity #1 | Chains: A
ANTIBODY (CB 4-1) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62747
95 % 1 8 9670 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 15 26 2237
70 % 1712 2479 1
50 % 3470 5021 1
40 % 3470 5021 1
30 % 4110 5951 1
Entity #2 | Chains: B
ANTIBODY (CB 4-1) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 9503
95 % 1 8 9673 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 8 9565
70 % 1674 2429 2
50 % 3471 5021 1
40 % 3471 5021 1
30 % 4111 5951 1
Entity #3 | Chains: C
PEPTIDE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures