Sequence Similarity Clusters for the Entities in PDB 1BNL

Entity #1 | Chains: A,B,C,D
COLLAGEN XVIII protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22571
95 % 1 1 19464 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 18941
70 % 4 4 10110
50 % 5 5 8237
40 % 5 5 7566
30 % 5 5 6667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures