Sequence Similarity Clusters for the Entities in PDB 1BND

Entity #1 | Chains: A
BRAIN DERIVED NEUROTROPHIC FACTOR protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65384
95 % 1 2 33247
90 % 1 2 31814
70 % 1 2 28392
50 % 2 23 1277
40 % 2 23 1298
30 % 2 23 1273
Entity #2 | Chains: B
NEUROTROPHIN 3 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65385
95 % 1 4 14310 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 1 4 14045
70 % 1 4 13161
50 % 3 23 1277
40 % 3 23 1298
30 % 3 23 1273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.