Sequence Similarity Clusters for the Entities in PDB 1BN8

Entity #1 | Chains: A
PROTEIN (PECTATE LYASE) protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 33351
95 % 5 10 6730 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 5 10 6706
70 % 5 10 6548
50 % 5 11 5729
40 % 5 11 5381
30 % 6 12 4124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures