Sequence Similarity Clusters for the Entities in PDB 1BN8

Entity #1 | Chains: A
PROTEIN (PECTATE LYASE) protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38492
95 % 5 10 7318 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 5 10 7277
70 % 5 10 7074
50 % 5 11 6027
40 % 5 11 5603
30 % 7 17 2705

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures