Sequence Similarity Clusters for the Entities in PDB 1BN8

Entity #1 | Chains: A
PROTEIN (PECTATE LYASE) protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38681
95 % 5 11 7169 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 5 11 7129
70 % 5 11 6899
50 % 5 12 5832
40 % 5 12 5441
30 % 7 18 2745

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures