Sequence Similarity Clusters for the Entities in PDB 1BMQ

Entity #1 | Chains: A
PROTEIN (INTERLEUKIN-1 BETA CONVERTASE) protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 19 2744
95 % 26 29 2037 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.6
PDBFlex
90 % 26 29 2087
70 % 26 29 2098
50 % 26 29 2097
40 % 26 29 2102
30 % 26 29 2014
Entity #2 | Chains: B
PROTEIN (INTERLEUKIN-1 BETA CONVERTASE) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 20 2674
95 % 26 29 2053 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 26 29 2105
70 % 26 29 2118
50 % 26 29 2115
40 % 26 29 2116
30 % 26 29 2033

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures