Sequence Similarity Clusters for the Entities in PDB 1BMQ

Entity #1 | Chains: A
PROTEIN (INTERLEUKIN-1 BETA CONVERTASE) protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 18 2763
95 % 25 28 2020 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 25 28 2071
70 % 25 28 2072
50 % 25 28 2056
40 % 25 28 2047
30 % 25 28 1974
Entity #2 | Chains: B
PROTEIN (INTERLEUKIN-1 BETA CONVERTASE) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 19 2596
95 % 25 28 2060 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 25 28 2113
70 % 25 28 2113
50 % 25 28 2086
40 % 25 28 2078
30 % 25 28 1995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.