Sequence Similarity Clusters for the Entities in PDB 1BML

Entity #1 | Chains: A,B
PLASMIN protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 9001
95 % 9 10 3345
90 % 9 10 3392
70 % 9 10 3353
50 % 9 10 3264
40 % 1613 1719 4
30 % 1749 1869 6
Entity #2 | Chains: C,D
STREPTOKINASE protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35031
95 % 1 1 27891
90 % 1 1 26934
70 % 1 1 24368
50 % 1 1 20962
40 % 1 1 18559
30 % 1 1 15868

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures