Sequence Similarity Clusters for the Entities in PDB 1BMK

Entity #1 | Chains: A
PROTEIN (MAP KINASE P38) protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 21 1654
95 % 160 252 121 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.5
PDBFlex
90 % 160 252 124
70 % 162 256 134
50 % 292 474 51
40 % 293 481 62
30 % 2261 3941 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures