Sequence Similarity Clusters for the Entities in PDB 1BMK

Entity #1 | Chains: A
PROTEIN (MAP KINASE P38) protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 114 180 143
95 % 160 253 126 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.5
PDBFlex
90 % 160 253 130
70 % 162 257 144
50 % 293 476 66
40 % 294 484 84
30 % 2480 4300 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures