Sequence Similarity Clusters for the Entities in PDB 1BMF

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 29 271
95 % 41 41 261
90 % 41 41 270
70 % 59 59 162
50 % 71 71 159
40 % 71 71 175
30 % 71 71 191
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 40 193
95 % 42 42 262
90 % 42 42 271
70 % 72 72 132
50 % 72 72 160
40 % 72 72 176
30 % 72 72 192
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 39 832
95 % 39 39 1135
90 % 39 39 1162
70 % 41 41 1139
50 % 41 41 1195
40 % 65 65 598
30 % 65 65 593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.