Sequence Similarity Clusters for the Entities in PDB 1BMF

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 29 259
95 % 41 41 255
90 % 41 41 263
70 % 59 59 158
50 % 71 71 155
40 % 71 71 172
30 % 71 71 188
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 40 188
95 % 42 42 256
90 % 42 42 264
70 % 72 72 127
50 % 72 72 156
40 % 72 72 173
30 % 72 72 189
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 39 809
95 % 39 39 1111
90 % 39 39 1135
70 % 41 41 1119
50 % 41 41 1172
40 % 65 65 588
30 % 65 65 585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.