Sequence Similarity Clusters for the Entities in PDB 1BMF

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 29 275
95 % 41 41 267
90 % 41 41 276
70 % 59 59 165
50 % 71 71 163
40 % 71 71 179
30 % 71 71 193
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 40 198
95 % 42 42 268
90 % 42 42 277
70 % 72 72 136
50 % 72 72 164
40 % 72 72 180
30 % 72 72 194
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 39 839
95 % 39 39 1145
90 % 39 39 1174
70 % 41 41 1152
50 % 41 41 1209
40 % 65 65 604
30 % 65 65 602

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.