Sequence Similarity Clusters for the Entities in PDB 1BM7

Entity #1 | Chains: A,B
PROTEIN (TRANSTHYRETIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 145 163 49
95 % 238 282 11 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 238 282 12
70 % 239 288 16
50 % 243 292 20
40 % 243 292 29
30 % 248 304 40

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.