Sequence Similarity Clusters for the Entities in PDB 1BM7

Entity #1 | Chains: A,B
PROTEIN (TRANSTHYRETIN) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 153 175 48
95 % 246 295 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 246 295 12
70 % 247 301 15
50 % 251 305 22
40 % 251 305 35
30 % 256 317 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures