Sequence Similarity Clusters for the Entities in PDB 1BM3

Entity #1 | Chains: L
IMMUNOGLOBULIN OPG2 FAB, CONSTANT DOMAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38202
95 % 2 25 1750
90 % 3 32 1266
70 % 217 1752 2
50 % 537 4272 1
40 % 537 4272 1
30 % 578 5038 1
Entity #2 | Chains: H
IMMUNOGLOBULIN OPG2 FAB, VARIABLE DOMAIN protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 37202
95 % 1 2 28569
90 % 1 2 27569
70 % 261 2066 1
50 % 538 4272 1
40 % 538 4272 1
30 % 579 5038 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.