Sequence Similarity Clusters for the Entities in PDB 1BM3

Entity #1 | Chains: L
IMMUNOGLOBULIN OPG2 FAB, CONSTANT DOMAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39953
95 % 2 25 1853 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.6
PDBFlex
90 % 4 33 1291
70 % 285 2264 1
50 % 585 4587 1
40 % 585 4587 1
30 % 631 5394 1
Entity #2 | Chains: H
IMMUNOGLOBULIN OPG2 FAB, VARIABLE DOMAIN protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38908
95 % 1 2 29859 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.6
PDBFlex
90 % 1 2 28788
70 % 285 2222 2
50 % 586 4587 1
40 % 586 4587 1
30 % 632 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.