Sequence Similarity Clusters for the Entities in PDB 1BLN

Entity #1 | Chains: A,C
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42244
95 % 1 1 32162 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 138 158 148
70 % 1622 2474 1
50 % 3289 5011 1
40 % 3289 5011 1
30 % 3890 5941 1
Entity #2 | Chains: B,D
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (HEAVY CHAIN)) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41854
95 % 1 1 31926 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 9 15 2500
70 % 1587 2424 2
50 % 3290 5011 1
40 % 3290 5011 1
30 % 3891 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures