Sequence Similarity Clusters for the Entities in PDB 1BLN

Entity #1 | Chains: A,C
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40844
95 % 1 1 31161 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 138 156 148
70 % 1518 2329 1
50 % 3079 4717 1
40 % 3079 4717 1
30 % 3614 5571 1
Entity #2 | Chains: B,D
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (HEAVY CHAIN)) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40468
95 % 1 1 30932 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 9 15 2389
70 % 1486 2282 2
50 % 3080 4717 1
40 % 3080 4717 1
30 % 3615 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.