Sequence Similarity Clusters for the Entities in PDB 1BLN

Entity #1 | Chains: A,C
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41739
95 % 1 1 31790 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 138 158 146
70 % 1591 2426 1
50 % 3226 4913 1
40 % 3226 4913 1
30 % 3772 5780 1
Entity #2 | Chains: B,D
PROTEIN (MONOCLONAL ANTIBODY MRK-16 (HEAVY CHAIN)) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41353
95 % 1 1 31555 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 9 15 2464
70 % 1556 2376 2
50 % 3227 4913 1
40 % 3227 4913 1
30 % 3773 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures