Sequence Similarity Clusters for the Entities in PDB 1BKS

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 48 754
95 % 61 61 797 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 61 61 830
70 % 65 65 738
50 % 68 68 651
40 % 93 93 311
30 % 95 95 322
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 3095
95 % 63 63 768 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 63 63 795
70 % 64 64 820
50 % 85 85 316
40 % 85 85 334
30 % 86 86 335

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.