Sequence Similarity Clusters for the Entities in PDB 1BKM

Entity #1 | Chains: A
PP60 V-SRC TYROSINE KINASE TRANSFORMING PROTEIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67798
95 % 39 55 661 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 39 55 688
70 % 41 63 616
50 % 45 79 514
40 % 76 134 223
30 % 100 228 156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.