Sequence Similarity Clusters for the Entities in PDB 1BKD

Entity #1 | Chains: R
H-RAS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 57 565
95 % 125 142 216
90 % 170 191 127
70 % 170 191 145
50 % 207 237 129
40 % 350 423 26
30 % 590 745 16
Entity #2 | Chains: S
SON OF SEVENLESS-1 protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 19 2453
95 % 17 19 3072
90 % 17 19 3117
70 % 17 19 3088
50 % 17 19 3017
40 % 17 19 2952
30 % 17 19 2761

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.