Sequence Similarity Clusters for the Entities in PDB 1BKD

Entity #1 | Chains: R
H-RAS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 58 579
95 % 129 146 222
90 % 184 206 117
70 % 186 208 127
50 % 223 255 114
40 % 366 441 23
30 % 611 772 16
Entity #2 | Chains: S
SON OF SEVENLESS-1 protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 19 2559
95 % 17 19 3185
90 % 17 19 3230
70 % 17 19 3199
50 % 17 19 3127
40 % 17 19 3053
30 % 17 19 2859

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.