Sequence Similarity Clusters for the Entities in PDB 1BKC

Entity #1 | Chains: A,C
TUMOR NECROSIS FACTOR-ALPHA-CONVERTING ENZYME protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 2997
95 % 13 24 1103 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.2
PDBFlex
90 % 13 24 1121
70 % 13 24 1166
50 % 13 24 1202
40 % 13 24 1218
30 % 13 24 1196
Entity #2 | Chains: E
TUMOR NECROSIS FACTOR-ALPHA-CONVERTING ENZYME protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58016
95 % 14 24 1103 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.2
PDBFlex
90 % 14 24 1121
70 % 14 24 1166
50 % 14 24 1202
40 % 14 24 1218
30 % 14 24 1196
Entity #3 | Chains: I
TUMOR NECROSIS FACTOR-ALPHA-CONVERTING ENZYME protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58017
95 % 15 24 1103 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.2
PDBFlex
90 % 15 24 1121
70 % 15 24 1166
50 % 15 24 1202
40 % 15 24 1218
30 % 15 24 1196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.