Sequence Similarity Clusters for the Entities in PDB 1BK6

Entity #1 | Chains: A,B
KARYOPHERIN ALPHA protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32311
95 % 10 10 3602 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 10 10 3653
70 % 10 10 3592
50 % 92 93 465
40 % 95 96 489
30 % 95 96 491
Entity #2 | Chains: C,E
LARGE T ANTIGEN protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,F
LARGE T ANTIGEN protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.