Sequence Similarity Clusters for the Entities in PDB 1BK5

Entity #1 | Chains: A,B
KARYOPHERIN ALPHA protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 8053
95 % 4 10 3702 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 4 10 3756
70 % 4 10 3703
50 % 67 97 446
40 % 69 101 458
30 % 69 101 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures