Sequence Similarity Clusters for the Entities in PDB 1BJM

Entity #1 | Chains: A,B
LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12912
95 % 1 3 12427 Flexibility: Medium
Max RMSD: 15.2, Avg RMSD: 9.4
PDBFlex
90 % 1 3 12231
70 % 550 2327 1
50 % 1134 4713 1
40 % 1134 4713 1
30 % 1258 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.