Sequence Similarity Clusters for the Entities in PDB 1BJM

Entity #1 | Chains: A,B
LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12408
95 % 1 3 11938 Flexibility: Medium
Max RMSD: 15.2, Avg RMSD: 9.5
PDBFlex
90 % 1 3 11751
70 % 95 394 9
50 % 1083 4489 1
40 % 1083 4489 1
30 % 1198 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.