Sequence Similarity Clusters for the Entities in PDB 1BJJ

Entity #1 | Chains: A,B,C,D,E,F
AGKISTRODOTOXIN protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14331
95 % 1 2 5093 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 5114
70 % 4 5 3481
50 % 168 181 149
40 % 280 307 100
30 % 280 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures