Sequence Similarity Clusters for the Entities in PDB 1BJ6

Entity #1 | Chains: D
DNA (5'-D(*AP*CP*GP*CP*C)-3') dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
NUCLEOCAPSID PROTEIN 7 protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 14033
95 % 7 7 9498
90 % 7 7 9389
70 % 7 7 8921
50 % 7 7 8140
40 % 7 7 7490
30 % 7 7 6646

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.