Sequence Similarity Clusters for the Entities in PDB 1BJ3

Entity #1 | Chains: A
PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN A) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 13488
95 % 5 5 12852
90 % 5 5 12642
70 % 9 9 5813
50 % 17 28 1252
40 % 36 60 617
30 % 141 220 98
Entity #2 | Chains: B
PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN B) protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 7307
95 % 6 6 7872
90 % 6 6 7824
70 % 9 9 5831
50 % 16 25 1482
40 % 37 60 617
30 % 142 220 98

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.