Sequence Similarity Clusters for the Entities in PDB 1BJ1

Entity #1 | Chains: J,L
FAB FRAGMENT protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38431
95 % 47 154 70
90 % 263 640 3
70 % 758 1765 2
50 % 1887 4337 1
40 % 1887 4337 1
30 % 2118 5109 1
Entity #2 | Chains: H,K
FAB FRAGMENT protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37164
95 % 1 2 17004
90 % 1 2 16659
70 % 913 2096 1
50 % 1888 4337 1
40 % 1888 4337 1
30 % 2119 5109 1
Entity #3 | Chains: V,W
VASCULAR ENDOTHELIAL GROWTH FACTOR protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 29 351
95 % 15 34 382
90 % 15 34 410
70 % 15 36 428
50 % 17 39 484
40 % 19 43 493
30 % 19 48 456

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.